C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090541 Atp5g1-001 ENSMUSG00000006057 10090 - 11:96068852-96075670 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastLiverLungOvaryPlacentaTestisENSMUST00000090541
Transcript ID Adipose Adrenal Bladder Brain Breast Liver Lung Ovary Placenta Testis
ENSMUST00000090541 3.408±1.29 8.416±1.28 2.568±0.10 2.594±1.58 3.557±1.22 3.258±0.27 2.745±0.15 4.304±2.28 0.227±0.01 2.586±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0002 VISTA 11:95992065-96592579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0008289 IEA lipid binding
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338662 ATP5G2-002 protein_coding Homo_sapiens 0 289
ENST00000355938 ATP5G1-001 protein_coding Homo_sapiens 0 632
ENST00000393366 ATP5G1-003 protein_coding Homo_sapiens 0 566
ENST00000394349 ATP5G2-003 protein_coding Homo_sapiens 0 289
ENST00000429024 ATP5G1P5-001 processed_pseudogene Homo_sapiens 0 422
ENST00000436802 RP5-1198O20.5-001 processed_pseudogene Homo_sapiens 6.99949e-42 174
ENST00000444398 ATP5G1P7-001 processed_pseudogene Homo_sapiens 0 453
ENST00000451206 ATP5G1P6-001 processed_pseudogene Homo_sapiens 0 444
ENST00000463301 ATP5G1P3-001 processed_pseudogene Homo_sapiens 0 279
ENST00000495596 ATP5G2-001 retained_intron Homo_sapiens 0 289
ENST00000502964 ATP5G1-011 retained_intron Homo_sapiens 0 520
ENST00000503641 ATP5G1-006 protein_coding Homo_sapiens 0 429
ENST00000504591 ATP5G1-010 protein_coding Homo_sapiens 0 344
ENST00000506855 ATP5G1-008 protein_coding Homo_sapiens 0 453
ENST00000513347 ATP5G1-002 retained_intron Homo_sapiens 0 455
ENST00000513781 ATP5G1-009 processed_transcript Homo_sapiens 0 520
ENST00000514808 ATP5G1-007 protein_coding Homo_sapiens 0 403
ENST00000515060 ATP5G1-012 processed_transcript Homo_sapiens 0 455
ENST00000548397 RP11-43D4.2-001 processed_pseudogene Homo_sapiens 0 444
ENST00000549164 ATP5G2-006 protein_coding Homo_sapiens 0 289
ENST00000549748 ATP5G2-007 protein_coding Homo_sapiens 0 289
ENST00000552120 ATP5G2-008 retained_intron Homo_sapiens 0.00000000000004 82
ENST00000552242 ATP5G2-004 protein_coding Homo_sapiens 0 289
ENST00000602871 ATP5G2-010 protein_coding Homo_sapiens 0 289

Loading