C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adipogenesis associated, Mth938 domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393427 AAMDC-001 ENSG00000087884 9606 + 11:77821144-77872361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393427
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393427 21.344±0.00 11.997±0.00 7.411±0.00 23.444±18.75 38.346±0.00 17.419±12.71 11.673±0.00 5.040±0.00 24.562±0.00 18.118±6.14 20.462±7.69 15.646±1.84 21.783±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JG CIL_0001JG_0002 CGP 11:77659996-77918432
CIL_0006V5 CIL_0006V5_0002 CGP 11:77821109-77994678

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 ISS cytoplasm
GO:0043066 IBA negative regulation of apoptotic process
GO:0045600 IBA positive regulation of fat cell differentiation
GO:0045944 IBA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154779 Aamdc-009 nonsense_mediated_decay Mus_musculus 0 536
ENSMUST00000178078 Aamdc-202 protein_coding Mus_musculus 0 534
ENSMUST00000126085 Aamdc-012 nonsense_mediated_decay Mus_musculus 0 534
ENSMUST00000146605 Aamdc-008 protein_coding Mus_musculus 0 534
ENSMUST00000136757 Aamdc-005 protein_coding Mus_musculus 0 534
ENSMUST00000154853 Aamdc-001 protein_coding Mus_musculus 0 534
ENSMUST00000135998 Aamdc-010 protein_coding Mus_musculus 0 385
ENSMUST00000124552 Aamdc-006 protein_coding Mus_musculus 0 381
ENSMUST00000042627 Aamdc-201 protein_coding Mus_musculus 0 252
ENSMUST00000144858 Aamdc-004 protein_coding Mus_musculus 0 252
ENSMUST00000072725 Aamdc-003 protein_coding Mus_musculus 0 252
ENSMUST00000138060 Aamdc-002 protein_coding Mus_musculus 0 252
ENSMUST00000140805 Aamdc-007 processed_transcript Mus_musculus 0 248

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