C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 22 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393978 RBM22P2-001 ENSG00000213411 9606 - 13:30539597-30543461 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393978
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393978 0.064±0.00 0.507±0.00 0.114±0.00 0.232±0.09 0.313±0.10 0.157±0.10 0.082±0.06 0.322±0.06 0.129±0.00 0.071±0.00 0.044±0.00 0.421±0.22 0.055±0.01 0.265±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CF CIL_0004CF_0001 CGP 13:30456704-30660770
CIL_0007UA CIL_0007UA_0001 VISTA 13:30490781-31093754

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000005 64
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0000007 60
ENSMUST00000121101 Rspry1-002 protein_coding Mus_musculus 0.0001 53

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