C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aprataxin and PNKP like factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394342 APLF-201 ENSG00000169621 9606 + 2:68645822-68655576 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartOvaryPlacentaTestisENST00000394342
Transcript ID Adipose Colon Heart Ovary Placenta Testis
ENST00000394342 0.192±0.00 0.201±0.00 0.162±0.10 0.130±0.00 0.050±0.00 0.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I2 CIL_0008I2_0001 VISTA 2:67892841-68494859
CIL_0002DS CIL_0002DS_0002 CGP 2:68467561-68655576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004983 IEA neuropeptide Y receptor activity
GO:0005886 TAS plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050887 Prokr1-201 protein_coding Mus_musculus 0 1131
ENSMUST00000110156 Prokr2-002 protein_coding Mus_musculus 0 1016
ENSMUST00000049997 Prokr2-001 protein_coding Mus_musculus 0 1016
ENSMUST00000142766 Prokr2-003 protein_coding Mus_musculus 0 652
ENSMUST00000110157 Prokr2-005 protein_coding Mus_musculus 0 370

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