C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: A kinase (PRKA) anchor protein 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394518 AKAP13-004 ENSG00000170776 9606 + 15:85380715-85749355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000394518
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000394518 1.769±0.00 2.306±0.00 0.808±0.00 2.167±0.00 1.874±0.36 8.058±0.65 1.098±0.00 2.837±0.00 5.473±2.27 2.764±1.91 1.872±0.19 1.445±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RM CIL_0001RM_0001 CGP 15:85380571-85795030

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004691 IEA:NAS cAMP-dependent protein kinase activity
GO:0004871 TAS signal transducer activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006468 IEA protein phosphorylation
GO:0007264 TAS small GTPase mediated signal transduction
GO:0016020 IDA membrane
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035556 IEA intracellular signal transduction
GO:0043065 TAS positive regulation of apoptotic process
GO:0046872 IEA metal ion binding
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0097190 TAS apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166315 Akap13-201 protein_coding Mus_musculus 0 4843
ENSMUST00000147005 Akap13-001 protein_coding Mus_musculus 0 4154
ENSMUST00000094307 Akap13-008 protein_coding Mus_musculus 0 2163
ENSMUST00000154740 Akap13-010 protein_coding Mus_musculus 0 1038
ENSMUST00000136989 Akap13-002 retained_intron Mus_musculus 0 1018
ENSMUST00000125771 Akap13-004 protein_coding Mus_musculus 0 630
ENSMUST00000151560 Akap13-005 retained_intron Mus_musculus 0 612
ENSMUST00000137959 Akap13-007 protein_coding Mus_musculus 0 560
ENSMUST00000134001 Akap13-012 processed_transcript Mus_musculus 0 368
ENSMUST00000141288 Akap13-011 retained_intron Mus_musculus 0 302
ENSMUST00000132656 Akap13-009 retained_intron Mus_musculus 0 283

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