C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Bardet-Biedl syndrome 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395205 BBS4-201 ENSG00000140463 9606 + 15:72686179-72738475 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaENST00000395205
Transcript ID Muscle Placenta
ENST00000395205 0.581±0.00 0.984±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CQ CIL_0005CQ_0002 CGP 15:72686179-72785846

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 ISS microtubule cytoskeleton organization
GO:0000242 IDA pericentriolar material
GO:0000281 IMP mitotic cytokinesis
GO:0001103 IPI RNA polymerase II repressing transcription factor binding
GO:0001843 ISS neural tube closure
GO:0001895 ISS retina homeostasis
GO:0001947 ISS heart looping
GO:0003777 IMP microtubule motor activity
GO:0005515 IPI:IEA protein binding
GO:0005813 IDA centrosome
GO:0005814 IDA centriole
GO:0005929 IDA cilium
GO:0007286 ISS spermatid development
GO:0007601 IEA visual perception
GO:0007608 ISS sensory perception of smell
GO:0008152 IMP metabolic process
GO:0015031 IEA protein transport
GO:0016358 ISS dendrite development
GO:0019216 ISS regulation of lipid metabolic process
GO:0021756 ISS striatum development
GO:0021766 ISS hippocampus development
GO:0021987 ISS cerebral cortex development
GO:0030534 ISS adult behavior
GO:0031513 IDA nonmotile primary cilium
GO:0031514 IDA motile cilium
GO:0032402 ISS melanosome transport
GO:0032465 IMP regulation of cytokinesis
GO:0033365 ISS protein localization to organelle
GO:0034451 IDA centriolar satellite
GO:0034452 IDA dynactin binding
GO:0034454 IMP microtubule anchoring at centrosome
GO:0034464 IDA BBSome
GO:0035058 ISS nonmotile primary cilium assembly
GO:0036064 IDA ciliary basal body
GO:0038108 ISS negative regulation of appetite by leptin-mediated signaling pathway
GO:0042384 ISS cilium assembly
GO:0043014 IDA alpha-tubulin binding
GO:0045444 ISS fat cell differentiation
GO:0045494 ISS photoreceptor cell maintenance
GO:0045724 ISS positive regulation of cilium assembly
GO:0046548 ISS retinal rod cell development
GO:0046907 ISS intracellular transport
GO:0048487 IDA beta-tubulin binding
GO:0048854 ISS brain morphogenesis
GO:0050893 TAS sensory processing
GO:0051297 IMP centrosome organization
GO:0051457 IGI maintenance of protein location in nucleus
GO:0051877 ISS pigment granule aggregation in cell center
GO:0060027 ISS convergent extension involved in gastrulation
GO:0060170 IDA ciliary membrane
GO:0060271 ISS cilium morphogenesis
GO:0060296 ISS regulation of cilium beat frequency involved in ciliary motility
GO:0071539 IMP protein localization to centrosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026265 Bbs4-201 protein_coding Mus_musculus 0 1807

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