C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activity-dependent neuroprotector homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396029 ADNP-002 ENSG00000101126 9606 - 20:50889048-50931240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396029
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396029 3.178±0.00 1.928±0.93 3.161±1.89 4.964±0.00 1.379±0.65 5.823±0.00 1.888±0.00 2.660±1.00 2.669±2.01 7.146±0.74 3.747±1.92 10.627±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VZ CIL_0007VZ_0001 VISTA 20:50389770-50992625
CIL_00015P CIL_00015P_0001 CGP 20:50888919-50958555

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043524 IEA negative regulation of neuron apoptotic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057793 Adnp-002 protein_coding Mus_musculus 0 5572
ENSMUST00000138667 Gm20716-001 nonsense_mediated_decay Mus_musculus 0 5057
ENSMUST00000088001 Adnp-001 protein_coding Mus_musculus 0 5057
ENSMUST00000139984 Adnp-003 processed_transcript Mus_musculus 0 479
ENSMUST00000131200 Adnp-004 retained_intron Mus_musculus 0 337

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