C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activity-dependent neuroprotector homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396032 ADNP-006 ENSG00000101126 9606 - 20:50890303-50930990 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396032
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396032 7.823±0.00 4.961±0.00 5.768±0.00 6.332±1.96 7.600±1.67 4.654±0.27 3.417±1.45 5.747±1.44 4.773±1.95 6.107±1.74 7.069±2.72 10.044±5.33 5.700±1.57 8.822±3.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VZ CIL_0007VZ_0001 VISTA 20:50389770-50992625
CIL_00015P CIL_00015P_0001 CGP 20:50888919-50958555

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088001 Adnp-001 protein_coding Mus_musculus 0 5129
ENSMUST00000138667 Gm20716-001 nonsense_mediated_decay Mus_musculus 0 5060
ENSMUST00000057793 Adnp-002 protein_coding Mus_musculus 0 5057
ENSMUST00000139984 Adnp-003 processed_transcript Mus_musculus 0 479

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