C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: junction mediating and regulatory protein, p53 cofactor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396137 JMY-001 ENSG00000152409 9606 + 5:79236189-79327215 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396137 3.364±0.00 0.952±0.00 2.982±0.00 4.258±0.45 2.472±0.54 3.584±0.00 1.959±0.92 1.531±0.46 2.642±2.04 2.625±0.71 2.554±0.83 2.099±0.69 0.771±0.38 5.246±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 ISS transcription coactivator activity
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006281 IEA DNA repair
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0007050 ISS cell cycle arrest
GO:0031252 IDA cell leading edge
GO:0034314 ISS Arp2/3 complex-mediated actin nucleation
GO:0043065 ISS positive regulation of apoptotic process
GO:0051091 ISS positive regulation of sequence-specific DNA binding transcription factor activity
GO:0070060 ISS 'de novo' actin filament nucleation
GO:0070358 ISS actin polymerization-dependent cell motility
GO:0072332 IEA intrinsic apoptotic signaling pathway by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065537 Jmy-201 protein_coding Mus_musculus 0 3197

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