C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396338 PSMC1P9-001 ENSG00000255993 9606 + 12:18692762-18694096 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverMusclePlacentaTestisENST00000396338
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Muscle Placenta Testis
ENST00000396338 0.009±0.00 0.137±0.00 0.040±0.00 0.009±0.00 0.009±0.00 0.051±0.00 0.035±0.00 0.026±0.00 0.036±0.00 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FK CIL_0005FK_0001 CGP 12:18247614-18738057
CIL_0005FH CIL_0005FH_0001 CGP 12:18683169-18739187

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021595 Psmc1-201 protein_coding Mus_musculus 0 1600
ENSMUST00000122140 Gm9575-001 processed_pseudogene Mus_musculus 0 861

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