C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NHP2 ribonucleoprotein pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396362 NHP2P2-001 ENSG00000213786 9606 + 7:27048169-27048628 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000396362
Transcript ID Muscle Testis
ENST00000396362 0.087±0.00 0.108±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0002 UCNEbase 7:26506344-27606703
CIL_0003PD CIL_0003PD_0001 CGP 7:26667062-27095996
CIL_0008QL CIL_0008QL_0001 VISTA 7:26816432-27417045
CIL_000911 CIL_000911_0001 VISTA 7:26910239-27511438
CIL_000811 CIL_000811_0001 VISTA 7:26948649-27549872

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127405 Nhp2-001 protein_coding Mus_musculus 0 436
ENSMUST00000001083 Nhp2-002 retained_intron Mus_musculus 0 307

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