C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: frataxin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396366 FXN-004 ENSG00000165060 9606 + 9:69035762-69073022 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396366
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396366 0.795±0.00 2.703±0.00 0.318±0.00 1.197±0.38 1.109±0.00 4.832±0.00 2.364±0.00 3.463±2.95 1.028±0.17 2.450±0.78 5.687±3.07 2.065±0.38 3.684±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086N CIL_00086N_0001 VISTA 9:68507553-69110512

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004322 IDA ferroxidase activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005759 ISS mitochondrial matrix
GO:0005829 IDA cytosol
GO:0006783 NAS heme biosynthetic process
GO:0006811 IEA ion transport
GO:0006879 IMP cellular iron ion homeostasis
GO:0008198 IDA ferrous iron binding
GO:0008199 IDA:IEA ferric iron binding
GO:0008284 IMP positive regulation of cell proliferation
GO:0010039 IMP response to iron ion
GO:0010722 IDA regulation of ferrochelatase activity
GO:0016226 IEA iron-sulfur cluster assembly
GO:0016540 IDA protein autoprocessing
GO:0018283 IDA iron incorporation into metallo-sulfur cluster
GO:0030307 IMP positive regulation of cell growth
GO:0034986 IDA iron chaperone activity
GO:0043066 IMP negative regulation of apoptotic process
GO:0044281 TAS small molecule metabolic process
GO:0048554 IMP positive regulation of metalloenzyme activity
GO:0051347 IMP positive regulation of transferase activity
GO:0051349 IMP positive regulation of lyase activity
GO:0051353 IMP positive regulation of oxidoreductase activity
GO:0051536 IDA iron-sulfur cluster binding
GO:0051537 IDA 2 iron, 2 sulfur cluster binding
GO:0070301 IDA cellular response to hydrogen peroxide
GO:0090201 IMP negative regulation of release of cytochrome c from mitochondria

Homologs

No Homologs available.

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