C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyridoxal-dependent decarboxylase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396410 PDXDC1-001 ENSG00000179889 9606 + 16:14975103-15038332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverENST00000396410
Transcript ID Brain Colon Liver
ENST00000396410 2.164±0.00 5.062±0.00 3.108±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0016831 IEA carboxy-lyase activity
GO:0019752 IEA carboxylic acid metabolic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154150 Pdxdc1-003 retained_intron Mus_musculus 0 2649
ENSMUST00000023361 Pdxdc1-001 protein_coding Mus_musculus 0 2603
ENSMUST00000115804 Pdxdc1-010 protein_coding Mus_musculus 0 2433
ENSMUST00000115802 Pdxdc1-002 protein_coding Mus_musculus 0 1531
ENSMUST00000115803 Pdxdc1-004 protein_coding Mus_musculus 0 848
ENSMUST00000151774 Pdxdc1-012 processed_transcript Mus_musculus 0 562
ENSMUST00000139859 Pdxdc1-014 retained_intron Mus_musculus 0 525
ENSMUST00000148551 Pdxdc1-013 processed_transcript Mus_musculus 0 346
ENSMUST00000115805 Ntan1-004 protein_coding Mus_musculus 0 222
ENSMUST00000136618 Ntan1-008 processed_transcript Mus_musculus 0 222
ENSMUST00000023362 Ntan1-001 protein_coding Mus_musculus 0 222
ENSMUST00000137715 Pdxdc1-011 retained_intron Mus_musculus 2e-35 156

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