C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pyridoxal-dependent decarboxylase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179889 PDXDC1 9606 + 16:14974591-15139339 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000325823 PDXDC1-201 14975200-15022728 protein_coding
  ENST00000396410 PDXDC1-001 14975103-15038332 protein_coding
  ENST00000450288 PDXDC1-202 14997748-15038323 protein_coding
  ENST00000455313 PDXDC1-003 14975080-15029805 protein_coding
  ENST00000535621 PDXDC1-016 14975012-15139339 protein_coding
  ENST00000561930 PDXDC1-014 15009311-15017153 retained_intron
  ENST00000562119 PDXDC1-012 14975089-15036197 nonsense_mediated_decay
  ENST00000563522 PDXDC1-010 14974803-15006410 protein_coding
  ENST00000563667 PDXDC1-009 14974737-15006424 protein_coding
  ENST00000563679 PDXDC1-006 14974591-15036678 protein_coding
  ENST00000565362 PDXDC1-007 14975152-15008840 nonsense_mediated_decay
  ENST00000565986 PDXDC1-015 15034092-15036087 retained_intron
  ENST00000566426 PDXDC1-011 14975031-14998362 protein_coding
  ENST00000566633 PDXDC1-008 15025224-15032653 retained_intron
  ENST00000567306 PDXDC1-013 14976763-15017387 protein_coding
  ENST00000569715 PDXDC1-004 14975123-15037687 protein_coding
  ENST00000570001 PDXDC1-002 14975105-15037687 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396410ENST00000450288ENST00000535621ENST00000563679ENST00000566633ENST00000569715ENST00000570001
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396410 N/A N/A N/A 2.164±0.00 N/A 5.062±0.00 N/A N/A 3.108±0.00 N/A N/A N/A N/A N/A
ENST00000450288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.777±0.00 N/A N/A N/A
ENST00000535621 N/A N/A N/A N/A N/A N/A 1.576±0.00 N/A N/A N/A N/A 4.856±0.00 11.092±0.00 46.081±0.00
ENST00000563679 N/A N/A N/A N/A 5.915±0.00 N/A 1.393±0.00 4.678±0.00 N/A 4.031±0.00 N/A 4.692±0.00 N/A N/A
ENST00000566633 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.069±0.00 N/A N/A N/A N/A
ENST00000569715 16.189±0.00 10.874±0.00 10.880±0.00 9.668±3.63 12.017±2.80 19.254±4.61 7.005±4.74 21.456±8.97 17.387±11.81 11.311±4.70 6.436±4.20 14.310±5.74 25.803±5.22 70.372±22.06
ENST00000570001 N/A N/A N/A N/A 3.370±0.00 N/A N/A N/A 3.025±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0016831 IEA carboxy-lyase activity
GO:0019752 IEA carboxylic acid metabolic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007549 pdxdc1 pyridoxal-dependent decarboxylase domain containing 1 protein_coding Danio_rerio
ENSMUSG00000022680 Pdxdc1 pyridoxal-dependent decarboxylase domain containing 1 protein_coding Mus_musculus

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