C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenosine monophosphate deaminase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396553 AMPD3-003 ENSG00000133805 9606 + 11:10455320-10507126 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLungMuscleOvaryPlacentaENST00000396553
Transcript ID Adipose Adrenal Brain Breast Kidney Lung Muscle Ovary Placenta
ENST00000396553 2.051±0.00 3.027±0.00 2.894±0.00 2.457±0.00 0.672±0.00 1.753±0.00 11.905±0.00 1.669±0.67 1.508±1.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JA CIL_0004JA_0001 CGP 11:10304680-10507579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003876 IEA AMP deaminase activity
GO:0005829 TAS cytosol
GO:0006144 TAS purine nucleobase metabolic process
GO:0006196 TAS AMP catabolic process
GO:0019239 IEA deaminase activity
GO:0032264 IEA IMP salvage
GO:0043101 TAS purine-containing compound salvage
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005829 Ampd3-001 protein_coding Mus_musculus 0 2852
ENSMUST00000170374 Ampd3-003 protein_coding Mus_musculus 0 2850
ENSMUST00000106686 Ampd3-002 retained_intron Mus_musculus 0 885
ENSMUST00000148292 Ampd3-006 protein_coding Mus_musculus 0 634
ENSDART00000042755 ampd1-001 protein_coding Danio_rerio 0 553
ENSMUST00000143786 Ampd3-004 protein_coding Mus_musculus 0 444
ENSMUST00000147587 Ampd3-005 protein_coding Mus_musculus 0 383
ENSMUST00000176487 Ampd3-007 processed_transcript Mus_musculus 0 289
ENSMUST00000176210 Rnf141-011 nonsense_mediated_decay Mus_musculus 0 246
ENSMUST00000148367 Rnf141-010 retained_intron Mus_musculus 0 246

Loading