C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenosine monophosphate deaminase 1 (isoform M)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000042755 ampd1-001 ENSDARG00000033832 7955 + 8:11594771-11626258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000042755
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000042755 0.649±0.04 0.728±0.25 6.404±7.84 0.213±0.00 557.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WS CIL_0006WS_0001 CGP 8:11575134-11626258
CIL_0006WT CIL_0006WT_0001 CGP 8:11594771-11688121

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003876 IEA AMP deaminase activity
GO:0005575 ND cellular_component
GO:0006188 IEA IMP biosynthetic process
GO:0009168 IEA purine ribonucleoside monophosphate biosynthetic process
GO:0019239 IEA deaminase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078912 Ampd2-003 protein_coding Mus_musculus 0 195
ENSMUST00000102637 Ampd2-002 protein_coding Mus_musculus 0 195
ENSMUST00000102638 Ampd2-001 protein_coding Mus_musculus 0 195
ENSMUST00000127232 Ampd2-009 retained_intron Mus_musculus 3e-25 119
ENST00000396553 AMPD3-003 protein_coding Homo_sapiens 0 553
ENST00000396554 AMPD3-001 protein_coding Homo_sapiens 0 553
ENST00000444303 AMPD3-201 protein_coding Homo_sapiens 0 553
ENST00000528723 AMPD3-004 protein_coding Homo_sapiens 0 553
ENST00000529507 AMPD3-005 protein_coding Homo_sapiens 0 553
ENST00000529744 AMPD3-013 nonsense_mediated_decay Homo_sapiens 5.04467e-44 182
ENST00000529834 AMPD3-008 nonsense_mediated_decay Homo_sapiens 0 449
ENST00000530864 AMPD3-012 processed_transcript Homo_sapiens 0 342
ENST00000534047 AMPD3-007 nonsense_mediated_decay Homo_sapiens 0 385

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