C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenosine monophosphate deaminase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396554 AMPD3-001 ENSG00000133805 9606 + 11:10450681-10507018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000396554
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000396554 1.038±0.00 0.983±0.00 1.802±1.46 0.863±0.15 0.435±0.00 0.486±0.00 0.103±0.00 0.310±0.00 10.159±0.00 2.339±0.00 0.783±0.18 0.743±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JA CIL_0004JA_0001 CGP 11:10304680-10507579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003876 IEA AMP deaminase activity
GO:0005829 TAS cytosol
GO:0006144 TAS purine nucleobase metabolic process
GO:0006188 IEA IMP biosynthetic process
GO:0006196 TAS AMP catabolic process
GO:0019239 IEA deaminase activity
GO:0032264 IEA IMP salvage
GO:0043101 TAS purine-containing compound salvage
GO:0044281 TAS small molecule metabolic process
GO:0046031 IEA ADP metabolic process
GO:0046033 IEA AMP metabolic process
GO:0046034 IEA ATP metabolic process
GO:0046872 IEA metal ion binding
GO:0055086 TAS nucleobase-containing small molecule metabolic process
GO:0097009 IEA energy homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005829 Ampd3-001 protein_coding Mus_musculus 0 2850
ENSMUST00000170374 Ampd3-003 protein_coding Mus_musculus 0 2850
ENSMUST00000106686 Ampd3-002 retained_intron Mus_musculus 0 883
ENSMUST00000148292 Ampd3-006 protein_coding Mus_musculus 0 634
ENSDART00000042755 ampd1-001 protein_coding Danio_rerio 0 553
ENSMUST00000143786 Ampd3-004 protein_coding Mus_musculus 0 444
ENSMUST00000147587 Ampd3-005 protein_coding Mus_musculus 0 383
ENSMUST00000176487 Ampd3-007 processed_transcript Mus_musculus 0 289
ENSMUST00000176210 Rnf141-011 nonsense_mediated_decay Mus_musculus 0 246
ENSMUST00000148367 Rnf141-010 retained_intron Mus_musculus 0 246

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