C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 60
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397636 RPL7P60-001 ENSG00000214142 9606 - 7:100139629-100140682 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000397636
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000397636 0.015±0.00 0.096±0.00 0.047±0.00 0.015±0.00 0.064±0.05 0.028±0.00 0.078±0.00 0.069±0.00 0.014±0.00 0.102±0.07 0.048±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 619
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 484
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 484
ENSMUST00000136180 1700073E17Rik-004 processed_transcript Mus_musculus 0 416

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