C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700073E17 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148424 1700073E17Rik-001 ENSMUSG00000087204 10090 + 6:145391426-145392166 transcribed_processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverLungMuscleOvaryENSMUST00000148424
Transcript ID Adipose Adrenal Brain Breast Heart Liver Lung Muscle Ovary
ENSMUST00000148424 0.262±0.15 0.183±0.00 0.026±0.00 0.169±0.00 0.820±0.00 0.009±0.00 0.435±0.00 0.061±0.02 0.379±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X7 CIL_0004X7_0002 CGP 6:145216699-145614319

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333817 RPL7P26-001 processed_pseudogene Homo_sapiens 0 521
ENST00000352983 RPL7-001 protein_coding Homo_sapiens 0 643
ENST00000396465 RPL7-003 protein_coding Homo_sapiens 0 640
ENST00000396466 RPL7-004 protein_coding Homo_sapiens 0 640
ENST00000396467 RPL7-002 protein_coding Homo_sapiens 0 636
ENST00000397636 RPL7P60-001 processed_pseudogene Homo_sapiens 0 484
ENST00000403775 RPL7P27-001 processed_pseudogene Homo_sapiens 0 473
ENST00000404151 RPL7P25-001 processed_pseudogene Homo_sapiens 0 442
ENST00000411964 RPL7P8-003 processed_pseudogene Homo_sapiens 0 416
ENST00000417407 RPL7P10-001 processed_pseudogene Homo_sapiens 0 496
ENST00000424827 RPL7P44-001 processed_pseudogene Homo_sapiens 0 571
ENST00000425095 RPL7P37-001 processed_pseudogene Homo_sapiens 0 512
ENST00000428803 RPL7P7-001 processed_pseudogene Homo_sapiens 0 466
ENST00000429441 RPL7P56-001 processed_pseudogene Homo_sapiens 0 375
ENST00000431653 RPL7-005 protein_coding Homo_sapiens 0 327
ENST00000435330 RPL7-006 protein_coding Homo_sapiens 0 351
ENST00000437151 RPL7P29-001 processed_pseudogene Homo_sapiens 0 337
ENST00000437586 RPL7P11-001 processed_pseudogene Homo_sapiens 0 449
ENST00000444159 RPL7P33-001 processed_pseudogene Homo_sapiens 0 484
ENST00000446943 RPL7P35-001 processed_pseudogene Homo_sapiens 0 372
ENST00000447700 RPL7P59-001 processed_pseudogene Homo_sapiens 0 394
ENST00000450192 RPL7P31-001 processed_pseudogene Homo_sapiens 0 300
ENST00000451721 RPL7P61-001 processed_pseudogene Homo_sapiens 0 331
ENST00000457119 RPL7P32-001 processed_pseudogene Homo_sapiens 0 632
ENST00000461190 RPL7P15-001 processed_pseudogene Homo_sapiens 0 484
ENST00000468161 RPL7P1-001 processed_pseudogene Homo_sapiens 0 649
ENST00000468715 RPL7P9-001 processed_pseudogene Homo_sapiens 0 632
ENST00000471472 RPL7P5-001 processed_pseudogene Homo_sapiens 0 412
ENST00000480903 RPL7P6-001 processed_pseudogene Homo_sapiens 0 590
ENST00000487500 RPL7-008 processed_transcript Homo_sapiens 7e-22 108
ENST00000493052 RPL7P24-001 processed_pseudogene Homo_sapiens 0 505
ENST00000493874 RPL7P23-001 processed_pseudogene Homo_sapiens 0 604
ENST00000497299 RPL7P47-001 processed_pseudogene Homo_sapiens 0 418
ENST00000520308 RPL7P20-001 processed_pseudogene Homo_sapiens 0 466

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