C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: non imprinted in Prader-Willi/Angelman syndrome 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398013 NIPA2-003 ENSG00000140157 9606 + 15:22838687-22867716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastTestisENST00000398013
Transcript ID Brain Breast Testis
ENST00000398013 3.145±0.00 4.562±0.00 5.276±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015095 IEA magnesium ion transmembrane transporter activity
GO:0015693 IEA magnesium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117812 Nipa2-004 protein_coding Mus_musculus 0 1829
ENSMUST00000119201 Nipa2-003 protein_coding Mus_musculus 0 1807
ENSMUST00000032635 Nipa2-001 protein_coding Mus_musculus 0 1805
ENSMUST00000119041 Nipa2-007 protein_coding Mus_musculus 0 1805
ENSMUST00000122420 Gm8577-001 processed_pseudogene Mus_musculus 0 1166
ENSMUST00000147950 Nipa2-006 processed_transcript Mus_musculus 0 684
ENSMUST00000126604 Nipa2-009 protein_coding Mus_musculus 0 634
ENSMUST00000130239 Nipa2-010 retained_intron Mus_musculus 0 396
ENSMUST00000135849 Nipa2-002 retained_intron Mus_musculus 0 375
ENSMUST00000152649 Nipa2-005 protein_coding Mus_musculus 0 326

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