C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117812 Nipa2-004 ENSMUSG00000030452 10090 - 7:55931287-55962439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117812
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117812 2.221±0.87 3.830±0.19 3.372±0.53 1.273±0.36 2.597±1.04 5.849±1.26 1.798±0.36 2.603±1.06 2.182±0.06 2.409±0.88 3.225±1.12 7.098±1.83 0.723±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003A6 CIL_0003A6_0002 CGP 7:55841745-55962476
CIL_0006L7 CIL_0006L7_0002 CGP 7:55931287-56019954

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005769 IDA early endosome
GO:0005886 IDA plasma membrane
GO:0015095 IEA magnesium ion transmembrane transporter activity
GO:0015693 IEA:IDA magnesium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337451 NIPA2-001 protein_coding Homo_sapiens 0 1805
ENST00000359727 NIPA2-002 protein_coding Homo_sapiens 0 1120
ENST00000398013 NIPA2-003 protein_coding Homo_sapiens 0 1829
ENST00000398014 NIPA2-201 protein_coding Homo_sapiens 0 1805
ENST00000539711 NIPA2-004 protein_coding Homo_sapiens 0 1129
ENST00000560039 NIPA2-009 protein_coding Homo_sapiens 0 298

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