C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Nance-Horan syndrome (congenital cataracts and dental anomalies)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398097 NHS-003 ENSG00000188158 9606 + X:17635293-17735978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonKidneyOvaryPlacentaTestisENST00000398097
Transcript ID Adrenal Bladder Colon Kidney Ovary Placenta Testis
ENST00000398097 0.505±0.00 0.328±0.00 0.405±0.00 0.001±0.00 0.143±0.05 0.269±0.00 1.782±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002L3 CIL_0002L3_0002 CGP X:16946691-17735994

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005923 IEA tight junction
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087085 Nhs-001 protein_coding Mus_musculus 0 6809
ENSMUST00000081569 Nhs-201 protein_coding Mus_musculus 0 4647
ENSDART00000109567 nhsa-201 protein_coding Danio_rerio 0.000000000002 81

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