C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vestigial-like family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398399 VGLL3-001 ENSG00000206538 9606 - 3:86937969-86991107 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398399
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398399 8.453±0.00 1.700±0.00 6.140±4.33 2.268±1.80 0.573±0.34 0.231±0.00 4.564±0.00 5.093±0.00 0.740±0.00 1.321±1.09 5.830±3.60 1.710±1.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A0 CIL_0005A0_0002 CGP 3:86937969-87255548

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168064 Vgll3-201 protein_coding Mus_musculus 0 1421

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