C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit C-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398944 EIF3CL-201 ENSG00000205609 9606 - 16:28379579-28403841 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398944
Transcript ID Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398944 0.007±0.00 0.007±0.00 0.003±0.00 0.003±0.00 0.012±0.00 0.027±0.00 0.023±0.00 0.099±0.09 0.016±0.01 0.006±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IEA translation initiation factor activity
GO:0005515 IEA protein binding
GO:0005852 IEA eukaryotic translation initiation factor 3 complex
GO:0006413 IEA translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0031369 IEA translation initiation factor binding
GO:0033290 IEA eukaryotic 48S preinitiation complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032992 Eif3c-001 protein_coding Mus_musculus 0 3437
ENSMUST00000120465 Gm11224-001 processed_pseudogene Mus_musculus 0 1208
ENSMUST00000180459 G730046D07Rik-201 protein_coding Mus_musculus 1e-31 143

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