C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032992 Eif3c-001 ENSMUSG00000030738 10090 - 7:126546455-126566411 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032992
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032992 58.728±6.15 99.511±10.67 39.860±1.48 38.153±27.79 49.657±8.05 54.997±18.57 23.118±6.10 42.147±13.05 40.596±8.56 31.160±13.80 31.294±4.28 88.845±24.18 90.704±44.46 64.796±12.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IDA translation initiation factor activity
GO:0005852 IDA eukaryotic translation initiation factor 3 complex
GO:0006413 IDA translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0031369 IEA translation initiation factor binding
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0071541 IDA eukaryotic translation initiation factor 3 complex, eIF3m

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000121867 eif3c-201 protein_coding Danio_rerio 0 243
ENSDART00000016791 eif3c-001 protein_coding Danio_rerio 0 243
ENST00000331666 EIF3C-001 protein_coding Homo_sapiens 0 3445
ENST00000380876 EIF3CL-001 protein_coding Homo_sapiens 0 3437
ENST00000395587 EIF3C-201 protein_coding Homo_sapiens 0 3445
ENST00000398944 EIF3CL-201 protein_coding Homo_sapiens 0 3437
ENST00000563139 EIF3C-018 protein_coding Homo_sapiens 0 460
ENST00000564243 EIF3C-007 protein_coding Homo_sapiens 0 2926
ENST00000564839 EIF3C-013 retained_intron Homo_sapiens 0 292
ENST00000565932 EIF3C-011 retained_intron Homo_sapiens 0 2519
ENST00000566086 EIF3C-020 retained_intron Homo_sapiens 0 448
ENST00000566501 EIF3C-015 protein_coding Homo_sapiens 0 3441
ENST00000566519 EIF3C-019 retained_intron Homo_sapiens 0 407
ENST00000566866 EIF3C-010 protein_coding Homo_sapiens 0 3441
ENST00000568426 EIF3C-017 protein_coding Homo_sapiens 0 632
ENST00000569005 EIF3C-014 retained_intron Homo_sapiens 0 246
ENST00000569690 EIF3C-012 protein_coding Homo_sapiens 0 595

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