C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claudin 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399139 CLDN14-006 ENSG00000159261 9606 - 21:36460621-36466441 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLungMuscleOvaryPlacentaENST00000399139
Transcript ID Adipose Brain Breast Heart Kidney Lung Muscle Ovary Placenta
ENST00000399139 0.133±0.00 0.020±0.00 0.036±0.00 0.119±0.10 2.121±0.10 0.231±0.00 0.202±0.00 0.162±0.12 0.199±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Z6 CIL_0006Z6_0001 CGP 21:36385378-36576569
CIL_0006Z7 CIL_0006Z7_0001 CGP 21:36460621-36749917

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0005923 ISS tight junction
GO:0006461 TAS protein complex assembly
GO:0016021 IEA integral component of membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0034329 TAS cell junction assembly
GO:0042802 ISS identical protein binding
GO:0045216 TAS cell-cell junction organization
GO:0070830 TAS tight junction assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177648 Cldn14-202 protein_coding Mus_musculus 0 806
ENSMUST00000169391 Cldn14-201 protein_coding Mus_musculus 0 806
ENSMUST00000050962 Cldn14-001 protein_coding Mus_musculus 0 806
ENSMUST00000142083 Cldn14-003 processed_transcript Mus_musculus 0 257

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