C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006Z7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159261-ENSG00000159263 CGP 9606 21:36460621-36749917
GeneTranscriptPositionBiotype
ENSG00000159263 (SIM2)
single-minded family bHLH transcription factor 2 		ENST00000290399 (SIM2-001) 36699134-36749917 protein_coding
ENST00000431229 (SIM2-004) 36709181-36745871 protein_coding
ENST00000460783 (SIM2-003) 36699133-36710613 processed_transcript
ENST00000481185 (SIM2-002) 36699134-36746324 retained_intron
ENST00000483178 (SIM2-005) 36712566-36720587 protein_coding
ENSG00000223741 (PSMD4P1)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 pseudogene 1 		ENST00000433951 (PSMD4P1-001) 36485983-36487411 processed_pseudogene
ENSG00000224269 (AP000697.6)
 ENST00000430607 (AP000697.6-001) 36698773-36701564 antisense
ENSG00000230479 (AP000695.6)
 ENST00000429588 (AP000695.6-001) 36430360-36481070 antisense
ENSG00000231324 (AP000696.2)
 ENST00000457669 (AP000696.2-001) 36632681-36637033 lincRNA
ENSG00000233818 (AP000695.4)
 ENST00000428667 (AP000695.4-002) 36445731-36532408 antisense
ENST00000454980 (AP000695.4-001) 36445822-36460752 antisense
ENSG00000279365 (KB-176G8.1)
 ENST00000624669 (KB-176G8.1-001) 36485867-36487760 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0006Z7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047109-ENSMUSG00000062713 CGP 10090 16:93919031-94127032
GeneTranscriptPositionBiotype
ENSMUSG00000047109 (Cldn14)
claudin 14 		ENSMUST00000050962 (Cldn14-001) 93919032-94008837 protein_coding
ENSMUST00000137163 (Cldn14-002) 93919807-93929817 processed_transcript
ENSMUST00000142083 (Cldn14-003) 93919749-93929567 processed_transcript
ENSMUST00000169391 (Cldn14-201) 93919031-93929817 protein_coding
ENSMUST00000177648 (Cldn14-202) 93919031-93929567 protein_coding
ENSMUSG00000062713 (Sim2)
single-minded homolog 2 (Drosophila) 		ENSMUST00000072182 (Sim2-201) 94085260-94127032 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Z7_0001ENSG00000159263ENST00000290399ENST00000431229ENST00000460783ENST00000481185ENST00000483178ENSG00000223741ENST00000433951ENSG00000224269ENST00000430607ENSG00000230479ENST00000429588ENSG00000231324ENST00000457669ENSG00000233818ENST00000428667ENST00000454980ENSG00000279365ENST00000624669CIL_0006Z7_0002ENSMUSG00000047109ENSMUST00000050962ENSMUST00000137163ENSMUST00000142083ENSMUST00000169391ENSMUST00000177648ENSMUSG00000062713ENSMUST00000072182
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Z7_0001ENSG00000159263ENST00000290399ENST00000431229ENST00000460783ENST00000481185ENSG00000223741ENST00000433951ENSG00000224269ENST00000430607ENSG00000230479ENST00000429588ENSG00000231324ENST00000457669ENSG00000233818ENST00000428667ENST00000454980ENSG00000279365ENST00000624669CIL_0006Z7_0002ENSMUSG00000047109ENSMUST00000050962ENSMUST00000137163ENSMUST00000142083ENSMUST00000169391ENSMUST00000177648ENSMUSG00000062713ENSMUST00000072182
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159263 ENST00000290399 0.106±0.00 0.416±0.00 1.628±0.00 0.684±0.27 0.292±0.25 0.223±0.09 0.094±0.07 1.728±1.71 0.193±0.10 N/A 0.972±0.79 3.000±2.01 0.117±0.03 0.449±0.24
ENST00000431229 N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000460783 0.093±0.00 0.356±0.00 2.706±0.00 N/A N/A N/A 0.136±0.00 0.021±0.00 N/A 0.129±0.06 N/A 1.523±0.00 N/A N/A
ENST00000481185 0.039±0.00 N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A 0.088±0.00 0.097±0.00 N/A N/A N/A
ENST00000483178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223741 ENST00000433951 0.234±0.00 0.303±0.00 0.143±0.00 0.167±0.00 0.109±0.07 0.210±0.00 0.201±0.00 0.087±0.00 0.200±0.00 0.392±0.00 1.099±0.45 0.134±0.10 0.049±0.00 0.235±0.02
ENSG00000224269 ENST00000430607 N/A N/A N/A N/A N/A N/A N/A 0.858±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000230479 ENST00000429588 0.760±0.00 0.173±0.00 N/A 0.146±0.00 0.307±0.15 0.054±0.00 N/A 0.576±0.42 0.342±0.28 N/A 0.461±0.07 0.844±0.55 0.307±0.12 0.081±0.06
ENSG00000231324 ENST00000457669 N/A N/A N/A 0.041±0.00 N/A N/A N/A 0.504±0.00 N/A N/A N/A 0.146±0.12 N/A 0.029±0.00
ENSG00000233818 ENST00000428667 0.310±0.00 N/A N/A 0.056±0.00 0.163±0.00 0.034±0.00 N/A N/A N/A 0.214±0.00 0.255±0.00 0.149±0.06 0.333±0.26 N/A
ENST00000454980 0.169±0.00 N/A N/A N/A N/A 0.146±0.00 N/A N/A N/A N/A 1.656±0.63 0.167±0.08 N/A 0.173±0.02
ENSG00000279365 ENST00000624669 0.107±0.00 0.107±0.00 N/A 0.073±0.00 0.058±0.00 0.030±0.00 0.100±0.00 0.181±0.00 0.086±0.00 0.057±0.00 0.115±0.04 0.093±0.00 0.061±0.00 0.070±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000047109 ENSMUST00000050962 N/A N/A N/A 0.072±0.01 N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.107±0.00
ENSMUST00000137163 0.072±0.00 N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142083 N/A N/A N/A N/A 0.235±0.13 N/A N/A 0.275±0.00 N/A 0.069±0.02 N/A 0.218±0.02 0.447±0.00 N/A
ENSMUST00000169391 N/A N/A N/A N/A N/A N/A N/A N/A 3.038±2.26 N/A N/A N/A 0.222±0.05 0.453±0.08
ENSMUST00000177648 0.037±0.00 0.058±0.00 0.007±0.00 0.012±0.00 0.068±0.03 5.893±0.48 N/A 0.095±0.05 5.072±3.71 0.029±0.01 0.070±0.00 0.060±0.01 0.173±0.10 0.337±0.05
ENSMUSG00000062713 ENSMUST00000072182 0.012±0.01 N/A 0.003±0.00 0.089±0.08 0.147±0.04 0.014±0.00 0.057±0.01 3.395±1.18 0.011±0.01 1.853±1.84 5.572±0.58 0.031±0.02 0.077±0.06 0.035±0.02

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