C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras association and DIL domains
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399583 RADIL-001 ENSG00000157927 9606 - 7:4799105-4883719 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399583
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399583 1.739±0.00 0.531±0.00 0.959±0.91 2.873±0.00 2.472±0.00 0.356±0.00 0.359±0.00 0.104±0.00 3.522±0.00 0.461±0.00 0.579±0.28 1.791±0.52 17.109±7.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MG CIL_0002MG_0001 CGP 7:4737388-4883719
CIL_0002MD CIL_0002MD_0001 CGP 7:4797055-4883719

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005874 IDA microtubule
GO:0007165 IEA signal transduction
GO:0007275 IEA multicellular organismal development
GO:0034446 IDA substrate adhesion-dependent cell spreading

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085758 Radil-005 protein_coding Mus_musculus 0 2481
ENSMUST00000063635 Radil-001 protein_coding Mus_musculus 0 2481
ENSMUST00000139824 Radil-003 retained_intron Mus_musculus 0 2314
ENSMUST00000110785 Radil-002 protein_coding Mus_musculus 0 2180
ENSMUST00000110784 Radil-007 protein_coding Mus_musculus 0 1914

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