C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002MD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157927-ENSG00000157927 CGP 9606 7:4797055-4883719
GeneTranscriptPositionBiotype
ENSG00000157927 (RADIL)
Ras association and DIL domains 		ENST00000399583 (RADIL-001) 4799105-4883719 protein_coding
ENST00000445392 (RADIL-002) 4797055-4883654 nonsense_mediated_decay
ENST00000457174 (RADIL-006) 4877738-4882209 protein_coding
ENST00000469399 (RADIL-007) 4805245-4815333 retained_intron
ENST00000472999 (RADIL-003) 4799105-4804068 retained_intron
ENST00000473130 (RADIL-004) 4799109-4832209 retained_intron
ENST00000484211 (RADIL-005) 4815278-4832219 retained_intron
ENSG00000206895 (Y_RNA)
Y RNA 		ENST00000384168 (Y_RNA.1-647) 4811188-4811289 misc_RNA
ENSG00000213935 (AC092610.12)
 ENST00000454916 (AC092610.12-001) 4865432-4865804 processed_pseudogene
ENSG00000218823 (PAPOLB)
poly(A) polymerase beta (testis specific) 		ENST00000404991 (PAPOLB-001) 4857733-4861994 protein_coding
CIL_0002MD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029576-ENSMUSG00000029576 CGP 10090 5:142484839-142551098
GeneTranscriptPositionBiotype
ENSMUSG00000029576 (Radil)
Ras association and DIL domains 		ENSMUST00000063635 (Radil-001) 142484839-142551098 protein_coding
ENSMUST00000085758 (Radil-005) 142484842-142545028 protein_coding
ENSMUST00000110784 (Radil-007) 142484867-142509659 protein_coding
ENSMUST00000110785 (Radil-002) 142484879-142551077 protein_coding
ENSMUST00000129212 (Radil-008) 142543618-142550965 protein_coding
ENSMUST00000139278 (Radil-009) 142508120-142509494 protein_coding
ENSMUST00000139824 (Radil-003) 142484842-142551062 retained_intron
ENSMUST00000150380 (Radil-010) 142486483-142487569 retained_intron
ENSMUSG00000074817 (Papolb)
poly (A) polymerase beta (testis specific) 		ENSMUST00000099400 (Papolb-001) 142525838-142530076 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MD_0001ENSG00000157927ENST00000399583ENST00000445392ENST00000457174ENST00000469399ENST00000472999ENST00000473130ENST00000484211ENSG00000206895ENST00000384168ENSG00000213935ENST00000454916ENSG00000218823ENST00000404991CIL_0002MD_0002ENSMUSG00000029576ENSMUST00000063635ENSMUST00000085758ENSMUST00000110784ENSMUST00000110785ENSMUST00000129212ENSMUST00000139278ENSMUST00000139824ENSMUST00000150380ENSMUSG00000074817ENSMUST00000099400
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MD_0001ENSG00000157927ENST00000399583ENST00000445392ENST00000457174ENST00000472999ENST00000473130ENSG00000206895ENST00000384168ENSG00000213935ENST00000454916ENSG00000218823ENST00000404991CIL_0002MD_0002ENSMUSG00000029576ENSMUST00000063635ENSMUST00000085758ENSMUST00000110784ENSMUST00000110785ENSMUST00000129212ENSMUST00000139824ENSMUST00000150380ENSMUSG00000074817ENSMUST00000099400
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157927 ENST00000399583 1.739±0.00 0.531±0.00 N/A 0.959±0.91 2.873±0.00 2.472±0.00 0.356±0.00 0.359±0.00 0.104±0.00 3.522±0.00 0.461±0.00 0.579±0.28 1.791±0.52 17.109±7.77
ENST00000445392 N/A N/A 0.014±0.00 N/A 0.024±0.00 N/A N/A N/A 0.031±0.01 0.075±0.00 N/A 0.064±0.05 N/A N/A
ENST00000457174 N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A 0.154±0.12 N/A 0.571±0.00 N/A N/A N/A
ENST00000469399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472999 N/A N/A N/A 0.285±0.00 N/A N/A 0.232±0.00 N/A N/A N/A N/A 0.666±0.00 N/A N/A
ENST00000473130 N/A 1.361±0.00 N/A N/A N/A N/A 0.356±0.00 N/A N/A N/A N/A 0.292±0.00 1.397±0.67 N/A
ENST00000484211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206895 ENST00000384168 N/A N/A N/A N/A N/A N/A 0.327±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000213935 ENST00000454916 0.072±0.00 0.150±0.00 N/A N/A N/A 0.102±0.00 0.135±0.00 N/A N/A 0.111±0.08 0.230±0.00 N/A 0.052±0.00 0.101±0.00
ENSG00000218823 ENST00000404991 N/A 0.007±0.00 N/A 0.015±0.00 0.039±0.01 0.153±0.00 0.013±0.01 0.033±0.00 0.129±0.00 0.310±0.00 0.088±0.00 0.009±0.00 0.007±0.00 13.315±5.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029576 ENSMUST00000063635 3.203±1.92 1.021±0.00 0.970±0.08 0.998±0.43 1.321±1.09 0.662±0.00 0.601±0.11 0.156±0.02 0.011±0.00 3.729±0.42 N/A 0.706±0.16 0.155±0.07 7.034±3.68
ENSMUST00000085758 N/A 0.582±0.21 0.222±0.00 N/A 1.935±0.00 0.509±0.00 N/A N/A 0.017±0.01 4.171±0.00 N/A 0.416±0.13 0.244±0.09 N/A
ENSMUST00000110784 N/A N/A N/A 1.773±0.28 N/A 0.484±0.00 N/A 0.098±0.00 0.034±0.02 3.512±1.16 0.207±0.04 0.867±0.23 0.278±0.13 N/A
ENSMUST00000110785 N/A 0.496±0.21 N/A 0.868±0.00 0.978±0.19 0.234±0.04 0.299±0.00 0.027±0.00 N/A 1.428±0.00 0.185±0.00 0.604±0.08 N/A 2.865±0.69
ENSMUST00000129212 N/A N/A N/A N/A 2.297±0.00 N/A N/A N/A 0.027±0.00 N/A 0.422±0.09 N/A N/A N/A
ENSMUST00000139278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139824 1.247±1.02 0.512±0.06 N/A 0.925±0.00 0.928±0.47 0.256±0.11 0.175±0.00 0.062±0.02 0.033±0.00 2.110±0.52 0.160±0.08 0.562±0.24 0.209±0.00 1.797±0.00
ENSMUST00000150380 N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A 0.254±0.00 N/A N/A N/A
ENSMUSG00000074817 ENSMUST00000099400 0.071±0.04 0.055±0.02 0.023±0.00 0.114±0.06 0.065±0.05 0.039±0.01 0.032±0.01 0.030±0.02 0.010±0.01 0.133±0.03 0.008±0.00 0.063±0.04 0.049±0.03 91.265±31.77

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