C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401061 MMACHC-001 ENSG00000132763 9606 + 1:45500053-45513382 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyTestisENST00000401061
Transcript ID Kidney Testis
ENST00000401061 4.026±0.00 3.798±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0009235 TAS cobalamin metabolic process
GO:0009236 IEA cobalamin biosynthetic process
GO:0031419 IEA cobalamin binding
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030453 Mmachc-001 protein_coding Mus_musculus 0 830
ENSMUST00000143330 Mmachc-002 processed_transcript Mus_musculus 0 303
ENSMUST00000135573 Prdx1-001 protein_coding Mus_musculus 9e-35 154
ENSMUST00000106470 Prdx1-003 protein_coding Mus_musculus 2e-31 143
ENSMUST00000180210 Gm21399-201 processed_pseudogene Mus_musculus 3e-29 135
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0001 55

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