C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mex-3 RNA binding family member D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402693 MEX3D-002 ENSG00000181588 9606 - 19:1554669-1568058 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000402693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000402693 10.353±0.00 1.935±0.00 0.273±0.00 2.191±1.65 3.619±3.10 3.264±2.67 1.019±0.96 1.560±0.00 1.644±0.56 4.154±3.76 0.564±0.34 5.457±5.12 5.021±2.11 9.536±3.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066Y CIL_00066Y_0001 CGP 19:1524074-1568058
CIL_0003YO CIL_0003YO_0001 CGP 19:1554669-1592801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0010609 NAS mRNA localization resulting in posttranscriptional regulation of gene expression
GO:0017091 IDA AU-rich element binding
GO:0044822 IDA poly(A) RNA binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0061157 NAS mRNA destabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062946 Mex3d-201 protein_coding Mus_musculus 0 1079
ENSMUST00000105350 Mex3d-001 protein_coding Mus_musculus 0 1079
ENSMUST00000123141 Mex3d-002 protein_coding Mus_musculus 0 211

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