C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: preferentially expressed antigen in melanoma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402697 PRAME-003 ENSG00000185686 9606 - 22:22547767-22559288 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLungOvaryPlacentaENST00000402697
Transcript ID Adipose Breast Colon Kidney Lung Ovary Placenta
ENST00000402697 0.066±0.00 0.027±0.00 0.059±0.00 0.301±0.00 0.032±0.00 2.180±0.41 1.780±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0008284 IDA positive regulation of cell proliferation
GO:0030154 IEA cell differentiation
GO:0040008 IEA regulation of growth
GO:0042974 IDA retinoic acid receptor binding
GO:0043066 IDA negative regulation of apoptotic process
GO:0045596 IDA negative regulation of cell differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0048387 IDA negative regulation of retinoic acid receptor signaling pathway

Homologs

No Homologs available.

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