C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine nucleotide binding protein (G protein), beta polypeptide 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403325 GNB1L-003 ENSG00000185838 9606 - 22:19788415-19854843 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryPlacentaENST00000403325
Transcript ID Colon Ovary Placenta
ENST00000403325 4.715±0.00 6.238±1.40 5.681±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487
CIL_0003KU CIL_0003KU_0002 CGP 22:19756703-19854939
CIL_0005F1 CIL_0005F1_0001 CGP 22:19783224-19854939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0007186 NAS G-protein coupled receptor signaling pathway
GO:0009898 NAS cytoplasmic side of plasma membrane
GO:0035556 NAS intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167778 Gnb1l-201 protein_coding Mus_musculus 0 839
ENSMUST00000090086 Gnb1l-001 protein_coding Mus_musculus 0 839
ENSMUST00000115600 Gnb1l-008 nonsense_mediated_decay Mus_musculus 0 422
ENSMUST00000115601 Gnb1l-009 protein_coding Mus_musculus 0 422
ENSMUST00000149035 Gnb1l-004 protein_coding Mus_musculus 0 279
ENSMUST00000139625 Gnb1l-005 protein_coding Mus_musculus 0 274

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