C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine dehydratase-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403593 SDSL-002 ENSG00000139410 9606 + 12:113422237-113438276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000403593
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000403593 0.829±0.00 0.887±0.00 1.261±0.00 1.179±1.03 2.278±0.00 0.609±0.00 0.229±0.16 7.815±6.64 35.394±0.00 0.900±0.81 0.170±0.00 6.853±1.29 4.532±0.87 3.427±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000842 CIL_000842_0001 VISTA 12:113363390-113966000

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003941 IEA L-serine ammonia-lyase activity
GO:0004794 IEA L-threonine ammonia-lyase activity
GO:0005739 IEA mitochondrion
GO:0006520 IEA cellular amino acid metabolic process
GO:0008150 ND biological_process
GO:0030170 IEA pyridoxal phosphate binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052258 Sdsl-001 protein_coding Mus_musculus 0 833
ENSMUST00000031594 Sdsl-002 protein_coding Mus_musculus 0 833

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