C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA methyltransferase 2 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403707 TRMT2A-005 ENSG00000099899 9606 - 22:20111875-20117392 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KS CIL_0003KS_0002 CGP 22:20080232-20117392

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001510 IEA RNA methylation
GO:0003676 IEA nucleic acid binding
GO:0004719 IEA protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0006396 IEA RNA processing
GO:0006400 IEA tRNA modification
GO:0006464 IEA cellular protein modification process
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0008173 IEA RNA methyltransferase activity
GO:0008176 IEA tRNA (guanine-N7-)-methyltransferase activity
GO:0031167 IEA rRNA methylation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184895 TRMT2A-010 protein_coding Mus_musculus 0 1611
ENSMUST00000183969 TRMT2A-002 protein_coding Mus_musculus 0 1611
ENSMUST00000183889 TRMT2A-003 retained_intron Mus_musculus 0 1611
ENSMUST00000100099 Trmt2a-010 protein_coding Mus_musculus 0 1611
ENSMUST00000115640 Trmt2a-002 protein_coding Mus_musculus 0 1611
ENSMUST00000127239 Trmt2a-003 retained_intron Mus_musculus 0 1611
ENSMUST00000184496 TRMT2A-004 retained_intron Mus_musculus 0 640
ENSMUST00000153292 Trmt2a-004 retained_intron Mus_musculus 0 640
ENSMUST00000185170 TRMT2A-008 protein_coding Mus_musculus 0 510
ENSMUST00000145112 Trmt2a-008 protein_coding Mus_musculus 0 510
ENSMUST00000183985 TRMT2A-007 retained_intron Mus_musculus 0 374
ENSMUST00000131211 Trmt2a-007 retained_intron Mus_musculus 0 374
ENSMUST00000184144 TRMT2A-006 retained_intron Mus_musculus 0 257
ENSMUST00000183589 TRMT2A-001 protein_coding Mus_musculus 0 257
ENSMUST00000059696 Trmt2a-006 retained_intron Mus_musculus 0 257
ENSMUST00000140206 Trmt2a-001 protein_coding Mus_musculus 0 257
ENSMUST00000184076 TRMT2A-005 retained_intron Mus_musculus 7e-34 150
ENSMUST00000147273 Trmt2a-005 retained_intron Mus_musculus 7e-34 150

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