C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003KS_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000035564-ENSDARG00000002830 | CGP | 7955 | 5:26189372-26212461  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000002830  (trmt2a)trm2 tRNA methyltransferase 2 homolog A (S. cerevisiae) |
ENSDART00000046384 (trmt2a-001)
|
26201336-26212461 | protein_coding | |
|
ENSDART00000142798 (trmt2a-002)
|
26203393-26204812 | processed_transcript | ||
|
ENSDARG00000035564 (dgcr8) DiGeorge syndrome critical region gene 8 |
ENSDART00000051554 (dgcr8-201)
|
26190534-26199389 | protein_coding | |
|
ENSDART00000124915 (dgcr8-202)
|
26190534-26199796 | protein_coding | ||
|
ENSDART00000144560 (dgcr8-001)
|
26189372-26201321 | protein_coding | ||
| CIL_0003KS_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000128191-ENSG00000099899 | CGP | 9606 | 22:20080232-20117392 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000099901 (RANBP1) RAN binding protein 1 |
ENST00000331821 (RANBP1-015)
|
20117548-20127181 | protein_coding | |
|
ENST00000402752 (RANBP1-001)
|
20117424-20127355 | protein_coding | ||
|
ENST00000411892 (RANBP1-012)
|
20117557-20125488 | protein_coding | ||
|
ENST00000416427 (RANBP1-006)
|
20117782-20122421 | protein_coding | ||
|
ENST00000418705 (RANBP1-009)
|
20117953-20127035 | protein_coding | ||
|
ENST00000421656 (RANBP1-007)
|
20117875-20122421 | protein_coding | ||
|
ENST00000423859 (RANBP1-008)
|
20117934-20126627 | protein_coding | ||
|
ENST00000430524 (RANBP1-201)
|
20115938-20127357 | protein_coding | ||
|
ENST00000432879 (RANBP1-004)
|
20115938-20122377 | protein_coding | ||
|
ENST00000435265 (RANBP1-002)
|
20115938-20127181 | nonsense_mediated_decay | ||
|
ENST00000448394 (RANBP1-011)
|
20122607-20127353 | processed_transcript | ||
|
ENST00000467920 (RANBP1-013)
|
20117653-20119529 | processed_transcript | ||
|
ENST00000486575 (RANBP1-003)
|
20124139-20127181 | retained_intron | ||
|
ENST00000488484 (RANBP1-005)
|
20117524-20122684 | retained_intron | ||
|
ENSG00000128191 (DGCR8) DGCR8 microprocessor complex subunit |
ENST00000351989 (DGCR8-001)
|
20080232-20111871 | protein_coding | |
|
ENST00000383024 (DGCR8-201)
|
20080232-20111875 | protein_coding | ||
|
ENST00000407755 (DGCR8-003)
|
20085822-20111872 | protein_coding | ||
|
ENST00000457069 (DGCR8-009)
|
20080569-20086339 | protein_coding | ||
|
ENST00000475941 (DGCR8-008)
|
20107572-20111261 | retained_intron | ||
|
ENST00000485802 (DGCR8-006)
|
20106567-20109184 | retained_intron | ||
|
ENST00000491892 (DGCR8-007)
|
20094712-20107036 | retained_intron | ||
|
ENST00000495351 (DGCR8-005)
|
20106182-20107575 | retained_intron | ||
|
ENST00000495826 (DGCR8-002)
|
20085820-20111872 | retained_intron | ||
|
ENST00000498171 (DGCR8-004)
|
20087036-20111877 | retained_intron | ||
|
ENSG00000278278 (MIR6816) microRNA 6816 |
ENST00000620368 (MIR6816-201)
|
20114686-20114751 | miRNA | |
Expression Patterns
|
