C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor 98
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405460 GPR98-001 ENSG00000164199 9606 + 5:90558800-91164221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLungOvaryTestisENST00000405460
Transcript ID Brain Breast Colon Lung Ovary Testis
ENST00000405460 0.995±0.57 0.150±0.00 0.600±0.00 2.030±0.00 0.324±0.26 0.316±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037K CIL_00037K_0002 CGP 5:90471748-90529584
CIL_0005KB CIL_0005KB_0002 CGP 5:90515611-91164221
CIL_0005KI CIL_0005KI_0002 CGP 5:90529344-91383359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002142 IEA stereocilia ankle link complex
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 NAS:IEA G-protein coupled receptor activity
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007154 IEA cell communication
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 TAS:IEA G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0007399 NAS nervous system development
GO:0007601 IEA visual perception
GO:0007605 IMP sensory perception of sound
GO:0009986 IDA cell surface
GO:0016020 NAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016337 NAS single organismal cell-cell adhesion
GO:0017022 IEA myosin binding
GO:0043235 IDA receptor complex
GO:0045494 IMP photoreceptor cell maintenance
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048496 IMP maintenance of organ identity
GO:0048839 IEA inner ear development
GO:0050877 IMP neurological system process
GO:0050910 IEA detection of mechanical stimulus involved in sensory perception of sound
GO:0050953 IMP sensory perception of light stimulus
GO:0060122 IEA inner ear receptor stereocilium organization
GO:0070062 IDA extracellular vesicular exosome
GO:1990075 IEA periciliary membrane compartment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095585 Gpr98-001 protein_coding Mus_musculus 0 16660
ENSMUST00000156627 Gpr98-006 retained_intron Mus_musculus 0 7843
ENSMUST00000109565 Gpr98-005 protein_coding Mus_musculus 0 6192
ENSMUST00000125698 Gpr98-009 nonsense_mediated_decay Mus_musculus 0 3965
ENSMUST00000126444 Gpr98-002 protein_coding Mus_musculus 0 3317
ENSMUST00000129725 Gpr98-007 retained_intron Mus_musculus 0 3280
ENSMUST00000128120 Gpr98-010 protein_coding Mus_musculus 0 1232
ENSMUST00000156631 Gpr98-011 processed_transcript Mus_musculus 0 870

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