C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005KB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000024693-ENSDARG00000021137 CGP 7955 5:50455344-50722918
GeneTranscriptPositionBiotype
ENSDARG00000021137 (gpr98)
G protein-coupled receptor 98
ENSDART00000008043 (gpr98-001) 50466238-50722918 protein_coding
ENSDARG00000024693 (lysmd3)
LysM, putative peptidoglycan-binding, domain containing 3
ENSDART00000031194 (lysmd3-001) 50455344-50463371 protein_coding
CIL_0005KB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176018-ENSG00000164199 CGP 9606 5:90515611-91164221
GeneTranscriptPositionBiotype
ENSG00000164199 (GPR98)
G protein-coupled receptor 98
ENST00000405460 (GPR98-001) 90558800-91164221 protein_coding
ENST00000425867 (GPR98-004) 90781081-91164215 protein_coding
ENST00000450321 (GPR98-012) 90672554-90676859 processed_transcript
ENST00000503852 (GPR98-011) 90854060-90863857 retained_intron
ENST00000504142 (GPR98-002) 90628559-90655855 protein_coding
ENST00000505845 (GPR98-010) 90846390-90848821 processed_transcript
ENST00000507314 (GPR98-008) 90791155-90793205 processed_transcript
ENST00000508842 (GPR98-006) 90529344-90622671 protein_coding
ENST00000509621 (GPR98-003) 90694060-90759982 protein_coding
ENST00000512205 (GPR98-005) 90640719-90643931 processed_transcript
ENST00000513828 (GPR98-009) 90804927-90807665 retained_intron
ENSG00000176018 (LYSMD3)
LysM, putative peptidoglycan-binding, domain containing 3
ENST00000315948 (LYSMD3-002) 90515626-90529581 protein_coding
ENST00000453259 (LYSMD3-004) 90519433-90529584 nonsense_mediated_decay
ENST00000500869 (LYSMD3-003) 90515611-90529561 protein_coding
ENST00000509384 (LYSMD3-001) 90518291-90529584 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KB_0001ENSDARG00000021137ENSDART00000008043ENSDARG00000024693ENSDART00000031194CIL_0005KB_0002ENSG00000164199ENST00000405460ENST00000425867ENST00000450321ENST00000503852ENST00000504142ENST00000505845ENST00000507314ENST00000508842ENST00000509621ENST00000512205ENST00000513828ENSG00000176018ENST00000315948ENST00000453259ENST00000500869ENST00000509384
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KB_0001ENSDARG00000021137ENSDART00000008043ENSDARG00000024693ENSDART00000031194CIL_0005KB_0002ENSG00000164199ENST00000405460ENST00000425867ENSG00000176018ENST00000315948ENST00000453259ENST00000500869ENST00000509384
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021137 ENSDART00000008043 N/A N/A N/A 1.030±0.13 N/A N/A 0.100±0.05 0.096±0.06 0.042±0.00 N/A 0.065±0.00 N/A N/A N/A
ENSDARG00000024693 ENSDART00000031194 N/A N/A N/A 5.705±1.00 N/A N/A 9.202±1.80 9.006±1.41 3.455±0.00 N/A 5.413±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164199 ENST00000405460 N/A N/A N/A 0.995±0.57 0.150±0.00 0.600±0.00 N/A N/A N/A 2.030±0.00 N/A 0.324±0.26 N/A 0.316±0.00
ENST00000425867 N/A N/A N/A 1.253±0.00 N/A N/A N/A N/A N/A N/A N/A 0.222±0.00 N/A 0.921±0.00
ENST00000450321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176018 ENST00000315948 4.111±0.00 3.637±0.00 2.249±0.00 3.000±0.00 2.630±0.00 4.002±0.77 3.709±0.00 4.728±3.10 3.000±0.00 3.964±0.00 1.338±0.91 3.634±1.47 2.789±0.12 3.586±0.00
ENST00000453259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.543±0.00 N/A N/A N/A
ENST00000500869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.422±0.00
ENST00000509384 N/A N/A 4.220±0.00 N/A 3.780±0.00 3.662±0.00 1.613±0.00 3.000±0.00 2.722±0.00 N/A N/A N/A N/A N/A

Loading