C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405767 B3GNT2-002 ENSG00000170340 9606 + 2:62215518-62224549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000405767
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000405767 0.902±0.00 2.918±0.00 0.831±0.00 0.988±0.38 2.865±0.22 0.848±0.00 2.396±0.00 0.649±0.00 2.072±0.00 0.390±0.00 2.577±1.48 2.342±0.21 0.676±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BY CIL_0003BY_0001 CGP 2:61888724-62224731

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006486 IEA protein glycosylation
GO:0008150 ND biological_process
GO:0008378 IEA galactosyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055549 B3gnt2-002 protein_coding Mus_musculus 0 1264
ENSMUST00000062844 B3gnt2-001 protein_coding Mus_musculus 0 1264
ENSMUST00000160826 Gm28048-001 protein_coding Mus_musculus 0 1264
ENSMUST00000173660 B3gnt2-003 protein_coding Mus_musculus 0 555

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