C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | claudin 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000406028  |
CLDN5-001 |
ENSG00000184113 |
9606 | - |
22:19523024-19527545  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008BW | CIL_0008BW_0001 | VISTA | 22:19453681-20054184 |
| CIL_00099J | CIL_00099J_0001 | VISTA | 22:19461833-20062532 |
| CIL_00095F | CIL_00095F_0001 | VISTA | 22:19497462-20100487 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005198 | IEA | structural molecule activity |
| GO:0005515 | IEA | protein binding |
| GO:0005886 | IEA | plasma membrane |
| GO:0005911 | IDA | cell-cell junction |
| GO:0005923 | ISS | tight junction |
| GO:0016021 | IEA | integral component of membrane |
| GO:0016338 | ISS | calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules |
| GO:0033270 | IEA | paranode region of axon |
| GO:0042552 | IEA | myelination |
| GO:0042802 | ISS | identical protein binding |
| GO:0043220 | IEA | Schmidt-Lanterman incisure |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000043577
|
Cldn5-201 | protein_coding | Mus_musculus | 0 | 771 |
