C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dystrobrevin, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407661 DTNB-004 ENSG00000138101 9606 - 2:25377243-25673634 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000407661
Transcript ID Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000407661 7.001±0.00 2.196±0.00 0.519±0.00 0.572±0.00 1.649±0.00 0.943±0.00 1.935±0.22 0.913±0.00 5.846±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JL CIL_0003JL_0002 CGP 2:25227855-25673647
CIL_0003JK CIL_0003JK_0002 CGP 2:25377198-25878516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173199 Dtnb-002 protein_coding Mus_musculus 0 2909
ENSMUST00000077930 Dtnb-014 protein_coding Mus_musculus 0 2627
ENSMUST00000164578 Dtnb-001 protein_coding Mus_musculus 0 2621
ENSMUST00000101637 Dtnb-013 nonsense_mediated_decay Mus_musculus 0 2573
ENSMUST00000174663 Dtnb-011 protein_coding Mus_musculus 0 2571
ENSMUST00000164607 Dtnb-004 nonsense_mediated_decay Mus_musculus 0 2492
ENSMUST00000174547 Dtnb-017 protein_coding Mus_musculus 0 2379
ENSMUST00000174290 Dtnb-009 nonsense_mediated_decay Mus_musculus 0 1814
ENSMUST00000172598 Dtnb-016 protein_coding Mus_musculus 0 1786
ENSMUST00000173240 Dtnb-007 protein_coding Mus_musculus 0 1618
ENSMUST00000173736 Dtnb-012 protein_coding Mus_musculus 0 1592
ENSMUST00000174639 Dtnb-008 nonsense_mediated_decay Mus_musculus 0 1583
ENSMUST00000174109 Dtnb-015 nonsense_mediated_decay Mus_musculus 0 1548
ENSMUST00000168806 Dtnb-006 retained_intron Mus_musculus 0 1314
ENSMUST00000173524 Dtnb-010 processed_transcript Mus_musculus 0 1275
ENSMUST00000174479 Dtnb-005 protein_coding Mus_musculus 0 1079
ENSMUST00000173483 Dtnb-003 nonsense_mediated_decay Mus_musculus 0 939
ENSMUST00000172504 Dtnb-021 retained_intron Mus_musculus 0 560
ENSMUST00000173542 Dtnb-023 protein_coding Mus_musculus 0 399
ENSMUST00000173498 Dtnb-020 processed_transcript Mus_musculus 0 363
ENSMUST00000173074 Dtnb-019 retained_intron Mus_musculus 0 302
ENSMUST00000173998 Dtnb-018 protein_coding Mus_musculus 0 239

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