C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003JL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015566-ENSDARG00000013020 CGP 7955 17:37107098-37324038
GeneTranscriptPositionBiotype
ENSDARG00000013020 (dtnbb)
dystrobrevin, beta b 		ENSDART00000104020 (dtnbb-201) 37237614-37319696 protein_coding
ENSDART00000145669 (dtnbb-001) 37237614-37324038 protein_coding
ENSDARG00000015566 (dnmt3ab)
DNA (cytosine-5-)-methyltransferase 3 alpha b 		ENSDART00000005239 (dnmt3ab-201) 37108463-37155973 protein_coding
ENSDART00000126823 (dnmt3ab-001) 37108385-37156049 protein_coding
ENSDART00000127557 (dnmt3ab-202) 37108538-37220126 protein_coding
ENSDART00000151921 (dnmt3ab-002) 37107098-37222477 protein_coding
ENSDARG00000081059 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000118961 (5S_rRNA.90-201) 37117956-37118073 rRNA
CIL_0003JL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119772-ENSG00000138101 CGP 9606 2:25227855-25673647
GeneTranscriptPositionBiotype
ENSG00000119772 (DNMT3A)
DNA (cytosine-5-)-methyltransferase 3 alpha 		ENST00000264709 (DNMT3A-001) 25227855-25342590 protein_coding
ENST00000321117 (DNMT3A-011) 25232976-25341885 protein_coding
ENST00000380746 (DNMT3A-002) 25232976-25252311 protein_coding
ENST00000380756 (DNMT3A-010) 25232977-25342489 nonsense_mediated_decay
ENST00000402667 (DNMT3A-013) 25234197-25252311 protein_coding
ENST00000406659 (DNMT3A-012) 25281452-25342590 protein_coding
ENST00000461228 (DNMT3A-006) 25239176-25243982 processed_transcript
ENST00000466601 (DNMT3A-007) 25236974-25242015 retained_intron
ENST00000470983 (DNMT3A-003) 25246757-25249703 processed_transcript
ENST00000474807 (DNMT3A-004) 25245262-25247899 retained_intron
ENST00000474887 (DNMT3A-008) 25235706-25244324 processed_transcript
ENST00000482935 (DNMT3A-015) 25235785-25243979 processed_transcript
ENST00000484184 (DNMT3A-005) 25246674-25247566 retained_intron
ENST00000491288 (DNMT3A-009) 25236930-25243970 processed_transcript
ENST00000496570 (DNMT3A-017) 25247050-25252083 processed_transcript
ENSG00000138101 (DTNB)
dystrobrevin, beta 		ENST00000288642 (DTNB-201) 25377245-25673647 protein_coding
ENST00000303659 (DTNB-022) 25596124-25653180 protein_coding
ENST00000349996 (DTNB-024) 25607287-25672946 protein_coding
ENST00000356599 (DTNB-009) 25377284-25673596 nonsense_mediated_decay
ENST00000398951 (DTNB-007) 25377243-25673550 nonsense_mediated_decay
ENST00000404103 (DTNB-003) 25377243-25673634 protein_coding
ENST00000405222 (DTNB-006) 25377243-25673634 protein_coding
ENST00000406818 (DTNB-001) 25377243-25673634 protein_coding
ENST00000407038 (DTNB-005) 25377243-25673634 protein_coding
ENST00000407186 (DTNB-010) 25377258-25673561 protein_coding
ENST00000407661 (DTNB-004) 25377243-25673634 protein_coding
ENST00000460418 (DTNB-021) 25628171-25639328 retained_intron
ENST00000472690 (DTNB-020) 25576829-25649930 processed_transcript
ENST00000473113 (DTNB-026) 25594889-25607293 processed_transcript
ENST00000474987 (DTNB-027) 25576953-25599043 processed_transcript
ENST00000479898 (DTNB-008) 25387194-25481645 retained_intron
ENST00000481841 (DTNB-018) 25388318-25497651 processed_transcript
ENST00000482145 (DTNB-015) 25388261-25481845 retained_intron
ENST00000485845 (DTNB-012) 25419102-25652660 retained_intron
ENST00000486555 (DTNB-016) 25433910-25497585 processed_transcript
ENST00000486826 (DTNB-025) 25628183-25673488 processed_transcript
ENST00000488457 (DTNB-011) 25377313-25379913 retained_intron
ENST00000489756 (DTNB-017) 25433910-25497619 processed_transcript
ENST00000489949 (DTNB-014) 25383683-25428016 retained_intron
ENST00000493386 (DTNB-019) 25576564-25596456 retained_intron
ENST00000493538 (DTNB-028) 25576516-25673429 retained_intron
ENST00000495466 (DTNB-023) 25607258-25650222 processed_transcript
ENST00000496972 (DTNB-202) 25377198-25650222 protein_coding
ENST00000497476 (DTNB-029) 25377245-25386095 processed_transcript
ENST00000498437 (DTNB-013) 25387224-25388640 retained_intron
ENSG00000221445 (MIR1301)
microRNA 1301 		ENST00000408518 (MIR1301-201) 25328633-25328744 miRNA
ENSG00000224220 (AC104699.1)
 ENST00000352271 (AC104699.1-001) 25421117-25427643 antisense
ENSG00000235072 (AC012074.2)
 ENST00000313031 (AC012074.2-002) 25369136-25370687 lincRNA
ENST00000431557 (AC012074.2-001) 25369173-25375845 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003JL_0001ENSDARG00000013020ENSDART00000104020ENSDART00000145669ENSDARG00000015566ENSDART00000005239ENSDART00000126823ENSDART00000127557ENSDART00000151921ENSDARG00000081059ENSDART00000118961CIL_0003JL_0002ENSG00000119772ENST00000264709ENST00000321117ENST00000380746ENST00000380756ENST00000402667ENST00000406659ENST00000461228ENST00000466601ENST00000470983ENST00000474807ENST00000474887ENST00000482935ENST00000484184ENST00000491288ENST00000496570ENSG00000138101ENST00000288642ENST00000303659ENST00000349996ENST00000356599ENST00000398951ENST00000404103ENST00000405222ENST00000406818ENST00000407038ENST00000407186ENST00000407661ENST00000460418ENST00000472690ENST00000473113ENST00000474987ENST00000479898ENST00000481841ENST00000482145ENST00000485845ENST00000486555ENST00000486826ENST00000488457ENST00000489756ENST00000489949ENST00000493386ENST00000493538ENST00000495466ENST00000496972ENST00000497476ENST00000498437ENSG00000221445ENST00000408518ENSG00000224220ENST00000352271ENSG00000235072ENST00000313031ENST00000431557
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003JL_0001ENSDARG00000013020ENSDART00000104020ENSDART00000145669ENSDARG00000015566ENSDART00000005239ENSDART00000151921ENSDARG00000081059ENSDART00000118961CIL_0003JL_0002ENSG00000119772ENST00000264709ENST00000321117ENST00000380746ENST00000380756ENST00000402667ENST00000406659ENST00000474807ENSG00000138101ENST00000288642ENST00000303659ENST00000349996ENST00000356599ENST00000398951ENST00000404103ENST00000405222ENST00000406818ENST00000407038ENST00000407186ENST00000407661ENST00000472690ENST00000474987ENST00000479898ENST00000481841ENST00000485845ENST00000486826ENST00000493538ENST00000496972ENST00000498437ENSG00000221445ENST00000408518ENSG00000224220ENST00000352271ENSG00000235072ENST00000313031ENST00000431557
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013020 ENSDART00000104020 N/A N/A N/A N/A N/A N/A 0.561±0.34 N/A 0.017±0.00 N/A 0.089±0.00 N/A N/A N/A
ENSDART00000145669 N/A N/A N/A N/A N/A N/A 0.169±0.00 0.096±0.00 N/A N/A 0.585±0.00 N/A N/A N/A
ENSDARG00000015566 ENSDART00000005239 N/A N/A N/A N/A N/A N/A N/A 0.554±0.00 0.052±0.00 N/A N/A N/A N/A N/A
ENSDART00000126823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000127557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151921 N/A N/A N/A N/A N/A N/A 0.843±0.51 0.975±0.17 N/A N/A 0.239±0.00 N/A N/A N/A
ENSDARG00000081059 ENSDART00000118961 N/A N/A N/A 90.412±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119772 ENST00000264709 1.026±0.00 0.818±0.00 N/A 1.955±0.00 1.318±0.00 1.312±0.00 0.355±0.00 2.282±0.00 0.350±0.00 1.030±0.00 1.005±0.00 3.875±2.52 0.972±0.08 N/A
ENST00000321117 1.998±0.00 1.918±0.00 N/A 0.534±0.00 N/A 0.708±0.21 0.855±0.40 0.941±0.39 0.667±0.34 2.161±0.00 1.323±0.45 1.490±0.62 2.909±0.33 2.881±0.00
ENST00000380746 N/A N/A 0.944±0.00 N/A 0.814±0.00 0.265±0.00 0.137±0.00 N/A 0.685±0.00 0.889±0.00 N/A 3.188±2.56 7.992±2.15 1.154±0.00
ENST00000380756 N/A N/A N/A N/A 0.679±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402667 N/A N/A N/A N/A 0.909±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.241±0.00
ENST00000406659 N/A 3.846±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474807 N/A N/A N/A N/A N/A N/A N/A 0.947±0.00 N/A N/A N/A N/A N/A N/A
ENST00000474887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138101 ENST00000288642 1.203±0.00 N/A N/A N/A 3.373±0.00 N/A N/A 2.604±0.00 N/A N/A N/A 0.759±0.25 1.422±0.15 4.518±0.00
ENST00000303659 N/A N/A N/A N/A N/A N/A 0.560±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000349996 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.272±0.00 N/A N/A N/A N/A
ENST00000356599 0.794±0.00 N/A N/A 6.587±0.00 N/A 0.255±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398951 0.946±0.00 N/A N/A N/A N/A N/A N/A N/A 0.397±0.00 2.122±0.00 0.096±0.00 1.868±0.39 1.784±0.00 3.908±0.75
ENST00000404103 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.965±0.00 N/A N/A N/A N/A
ENST00000405222 N/A N/A N/A N/A N/A 0.430±0.00 N/A N/A N/A N/A 0.339±0.00 N/A N/A N/A
ENST00000406818 N/A 1.518±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000407038 N/A N/A N/A 3.833±2.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000407186 N/A N/A N/A 2.469±0.00 N/A N/A N/A N/A N/A N/A N/A 1.287±0.28 2.550±0.43 N/A
ENST00000407661 N/A N/A N/A 7.001±0.00 2.196±0.00 0.519±0.00 0.572±0.00 1.649±0.00 0.943±0.00 N/A N/A 1.935±0.22 0.913±0.00 5.846±0.00
ENST00000460418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.872±0.00 N/A N/A
ENST00000473113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474987 N/A N/A N/A N/A N/A N/A N/A 1.521±0.00 N/A N/A N/A N/A N/A N/A
ENST00000479898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.142±0.00 2.744±0.00 N/A
ENST00000481841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.577±0.00 7.935±0.00 18.258±0.00
ENST00000482145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485845 N/A N/A 0.823±0.00 N/A N/A N/A 0.285±0.02 0.396±0.00 N/A 1.404±0.00 N/A N/A N/A N/A
ENST00000486555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486826 N/A N/A N/A N/A N/A N/A 1.089±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000488457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.00 N/A N/A N/A
ENST00000495466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496972 N/A N/A N/A N/A 0.650±0.00 N/A N/A N/A N/A N/A N/A N/A 2.357±0.00 N/A
ENST00000497476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498437 N/A N/A N/A N/A N/A N/A N/A 2.087±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000221445 ENST00000408518 N/A N/A N/A 0.772±0.00 1.412±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224220 ENST00000352271 N/A 5.823±0.00 N/A N/A N/A 1.234±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235072 ENST00000313031 0.101±0.00 0.428±0.00 0.037±0.00 0.535±0.30 0.225±0.06 0.103±0.00 0.076±0.00 0.521±0.00 0.091±0.00 0.141±0.11 0.033±0.00 0.152±0.07 0.044±0.00 0.198±0.08
ENST00000431557 N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A 0.867±0.65 N/A 0.356±0.00

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