C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409045 OSBPL6-004 ENSG00000079156 9606 + 2:178194523-178395772 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409045
Transcript ID Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409045 0.522±0.00 0.638±0.00 0.304±0.00 0.659±0.00 0.316±0.02 1.434±0.00 2.334±0.00 0.292±0.15 0.189±0.04 0.459±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z2 CIL_0000Z2_0001 CGP 2:178112424-178399433
CIL_0000Z1 CIL_0000Z1_0001 CGP 2:178194481-178451512

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006869 IEA lipid transport
GO:0008289 IEA lipid binding
GO:0031965 IDA nuclear membrane
GO:0097038 IDA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111930 Osbpl6-002 protein_coding Mus_musculus 0 2566
ENSMUST00000111929 Osbpl6-001 protein_coding Mus_musculus 0 2566
ENSMUST00000077972 Osbpl6-201 protein_coding Mus_musculus 0 2460
ENSMUST00000184442 Osbpl6-005 nonsense_mediated_decay Mus_musculus 0 2100
ENSMUST00000124601 Osbpl6-007 processed_transcript Mus_musculus 6e-35 154

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