C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409645 MGAT5-001 ENSG00000152127 9606 + 2:134120182-134454621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyOvaryPlacentaENST00000409645
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Ovary Placenta
ENST00000409645 3.426±0.00 1.098±0.00 1.749±0.00 1.186±0.00 3.437±1.94 0.714±0.31 5.003±0.00 1.335±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J4 CIL_0001J4_0001 CGP 2:132671799-134454621
CIL_0003S3 CIL_0003S3_0002 CGP 2:134119983-134719000

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005794 IEA Golgi apparatus
GO:0006487 IEA protein N-linked glycosylation
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030144 NAS alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038361 Mgat5-001 protein_coding Mus_musculus 0 2800
ENSMUST00000171405 Mgat5-201 protein_coding Mus_musculus 0 2750
ENSMUST00000190921 Mgat5-003 retained_intron Mus_musculus 0 1531
ENSMUST00000189427 Mgat5-002 retained_intron Mus_musculus 0 1240

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