C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tachykinin receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409848 TACR1-002 ENSG00000115353 9606 - 2:75051036-75199057 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryENST00000409848
Transcript ID Brain Colon Ovary
ENST00000409848 0.284±0.00 0.432±0.00 0.020±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004995 TAS tachykinin receptor activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006954 TAS inflammatory response
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007200 TAS phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0007217 IDA tachykinin receptor signaling pathway
GO:0009582 TAS detection of abiotic stimulus
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032122 Tacr1-201 protein_coding Mus_musculus 0 1260
ENSDART00000003278 tacr3l-001 protein_coding Danio_rerio 0 226
ENSMUST00000029822 Tacr3-201 protein_coding Mus_musculus 0 209
ENSMUST00000020278 Tacr2-201 protein_coding Mus_musculus 2e-31 141
ENSDART00000064485 TACR3 (2 of 3)-201 protein_coding Danio_rerio 2e-20 104

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