C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD207 molecule, langerin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000410009 CD207-001 ENSG00000116031 9606 - 2:70830214-70835822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000410009
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000410009 0.075±0.00 0.201±0.00 0.029±0.00 0.245±0.17 0.098±0.03 0.056±0.01 0.074±0.01 0.093±0.00 0.434±0.39 0.250±0.14 0.022±0.00 0.355±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZA CIL_0006ZA_0002 CGP 2:70808643-70835822
CIL_0003BZ CIL_0003BZ_0001 CGP 2:70830214-70933446

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005537 TAS mannose binding
GO:0005886 TAS plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030139 TAS endocytic vesicle
GO:0030246 IDA carbohydrate binding
GO:0030669 TAS clathrin-coated endocytic vesicle membrane
GO:0031901 TAS early endosome membrane
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0051607 IDA defense response to virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037882 Cd207-201 protein_coding Mus_musculus 0 494

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