C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003BZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116031-ENSG00000116035 CGP 9606 2:70830214-70933446
GeneTranscriptPositionBiotype
ENSG00000116031 (CD207)
CD207 molecule, langerin 		ENST00000410009 (CD207-001) 70830214-70835822 protein_coding
ENSG00000116035 (VAX2)
ventral anterior homeobox 2 		ENST00000234392 (VAX2-001) 70900590-70933446 protein_coding
ENSG00000237751 (LINC01143)
long intergenic non-protein coding RNA 1143 		ENST00000449073 (LINC01143-001) 70887871-70889959 lincRNA
ENSG00000277764 (Vax2os1_3)
Vax2os1 conserved region 3 		ENST00000622578 (Vax2os1_3.1-201) 70900155-70900351 misc_RNA
CIL_0003BZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034783-ENSMUSG00000034777 CGP 10090 6:83671207-83738313
GeneTranscriptPositionBiotype
ENSMUSG00000034777 (Vax2)
ventral anterior homeobox 2 		ENSMUST00000037807 (Vax2-004) 83711264-83738313 protein_coding
ENSMUSG00000034783 (Cd207)
CD207 antigen 		ENSMUST00000037882 (Cd207-201) 83671207-83677857 protein_coding
ENSMUSG00000085794 (Vax2os)
ventral anterior homeobox 2, opposite strand 		ENSMUST00000123402 (Vax2os-001) 83692806-83712201 antisense
ENSMUST00000150233 (Vax2os-002) 83702130-83703543 antisense
ENSMUST00000155159 (Vax2os-003) 83700157-83710932 antisense
ENSMUST00000173883 (Vax2os-005) 83702480-83703622 antisense
ENSMUSG00000098591 (Gm27631)
predicted gene, 27631 		ENSMUST00000184163 (Gm27631-201) 83703518-83703983 misc_RNA
ENSMUSG00000098848 (Gm27893)
predicted gene, 27893 		ENSMUST00000184408 (Gm27893-201) 83710739-83710932 misc_RNA
ENSMUSG00000099263 (Gm27772)
predicted gene, 27772 		ENSMUST00000184900 (Gm27772-201) 83702491-83702677 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BZ_0001ENSG00000116031ENST00000410009ENSG00000116035ENST00000234392ENSG00000237751ENST00000449073ENSG00000277764ENST00000622578CIL_0003BZ_0002ENSMUSG00000034777ENSMUST00000037807ENSMUSG00000034783ENSMUST00000037882ENSMUSG00000085794ENSMUST00000123402ENSMUST00000150233ENSMUST00000155159ENSMUST00000173883ENSMUSG00000098591ENSMUST00000184163ENSMUSG00000098848ENSMUST00000184408ENSMUSG00000099263ENSMUST00000184900
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BZ_0001ENSG00000116031ENST00000410009ENSG00000116035ENST00000234392ENSG00000237751ENST00000449073ENSG00000277764ENST00000622578CIL_0003BZ_0002ENSMUSG00000034777ENSMUST00000037807ENSMUSG00000034783ENSMUST00000037882ENSMUSG00000085794ENSMUST00000123402ENSMUST00000150233ENSMUST00000155159ENSMUST00000173883ENSMUSG00000098591ENSMUST00000184163ENSMUSG00000098848ENSMUST00000184408ENSMUSG00000099263ENSMUST00000184900
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116031 ENST00000410009 0.075±0.00 0.201±0.00 N/A 0.029±0.00 0.245±0.17 0.098±0.03 0.056±0.01 0.074±0.01 0.093±0.00 0.434±0.39 N/A 0.250±0.14 0.022±0.00 0.355±0.00
ENSG00000116035 ENST00000234392 0.629±0.00 0.229±0.00 N/A 0.283±0.15 1.305±0.00 1.163±0.00 0.135±0.10 0.261±0.00 N/A 0.466±0.00 N/A 0.806±0.43 0.303±0.15 0.031±0.00
ENSG00000237751 ENST00000449073 N/A N/A N/A N/A 0.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.492±0.00
ENSG00000277764 ENST00000622578 N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A N/A 0.278±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034777 ENSMUST00000037807 N/A 0.031±0.01 0.022±0.00 0.055±0.00 0.046±0.02 N/A N/A 0.043±0.00 0.011±0.00 0.020±0.00 0.055±0.00 0.093±0.05 2.400±2.84 0.871±0.35
ENSMUSG00000034783 ENSMUST00000037882 0.034±0.01 0.113±0.06 N/A 0.013±0.00 1.619±0.17 0.104±0.04 1.220±0.35 0.135±0.05 0.623±0.42 1.613±0.74 0.026±0.00 0.024±0.00 0.164±0.22 0.034±0.01
ENSMUSG00000085794 ENSMUST00000123402 N/A N/A 0.012±0.00 0.016±0.00 N/A N/A N/A N/A N/A N/A 0.021±0.00 0.095±0.00 0.259±0.24 N/A
ENSMUST00000150233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A N/A N/A
ENSMUST00000155159 0.011±0.00 0.040±0.01 N/A 0.010±0.00 0.033±0.01 0.026±0.00 0.012±0.00 0.010±0.00 0.010±0.01 0.009±0.00 0.012±0.00 0.042±0.02 0.058±0.07 0.319±0.17
ENSMUST00000173883 N/A N/A N/A 0.058±0.00 0.124±0.03 N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 2.147±0.77
ENSMUSG00000098591 ENSMUST00000184163 N/A N/A N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 13.883±12.27
ENSMUSG00000098848 ENSMUST00000184408 N/A N/A N/A 1.324±0.00 10.150±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099263 ENSMUST00000184900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 119.292±0.00

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