C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain binding protein 5 (BTK-associated)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412806 SH3BP5-003 ENSG00000131370 9606 - 3:15255004-15332556 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungTestisENST00000412806
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Testis
ENST00000412806 39.627±0.00 17.746±0.00 9.824±0.00 6.713±5.42 7.407±5.79 0.468±0.00 2.294±0.00 14.216±10.43 20.821±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EF CIL_0002EF_0002 CGP 3:15206152-15341368
CIL_0005AH CIL_0005AH_0001 CGP 3:15254853-15440566

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091903 Sh3bp5-001 protein_coding Mus_musculus 0 848
ENSMUST00000100730 Sh3bp5-003 protein_coding Mus_musculus 0 848
ENSMUST00000140002 Sh3bp5-002 nonsense_mediated_decay Mus_musculus 0 621

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