C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FGGY carbohydrate kinase domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413489 FGGY-007 ENSG00000172456 9606 + 1:59296795-59378837 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000413489
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000413489 4.963±0.00 4.127±0.00 0.773±0.00 2.088±0.00 0.958±0.00 5.354±0.00 5.794±0.00 2.776±0.00 8.890±0.00 1.148±0.00 2.542±0.00 3.233±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Y5 CIL_0008Y5_0001 VISTA 1:58756653-59358420
CIL_0007ZB CIL_0007ZB_0001 VISTA 1:58756772-59358111
CIL_0001N7 CIL_0001N7_0001 CGP 1:58780788-59767675
CIL_0001N8 CIL_0001N8_0001 CGP 1:59296638-59876378

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005975 IEA carbohydrate metabolic process
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176162 Fggy-018 processed_transcript Mus_musculus 0 640
ENSMUST00000079223 Fggy-001 protein_coding Mus_musculus 0 640
ENSMUST00000043335 Fggy-003 protein_coding Mus_musculus 0 614
ENSMUST00000176840 Fggy-014 processed_transcript Mus_musculus 0 420
ENSMUST00000131654 Fggy-006 nonsense_mediated_decay Mus_musculus 0 307
ENSMUST00000107091 Fggy-005 protein_coding Mus_musculus 9e-37 158

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