C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 780A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414720 ZNF780A-002 ENSG00000197782 9606 - 19:40071006-40090938 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000414720
Transcript ID Muscle
ENST00000414720 0.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047W CIL_00047W_0001 CGP 19:40028260-40090938

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA:IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182746 Gm26920-001 nonsense_mediated_decay Mus_musculus 9e-22 110
ENSMUST00000182248 Zfp566-002 retained_intron Mus_musculus 9e-22 110
ENSMUST00000088785 Zfp566-001 protein_coding Mus_musculus 3e-21 108

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